Roche iScan HT IVD User manual

Type
User manual

This manual is also suitable for

Ventana Medical Systems, Inc.
www.ventana.com
Part No.: Part No.: PL-000119-EN Rev. H
May 2019
VENTANA iScan HT User Guide
Version 1.1
ii VENTANA iScan HT User Guide
VENTANA iScan HT User Guide
Copyright
Copyright © 2012-2019. Ventana Medical Systems, Inc.
Trademarks
VENTANA, VIRTUOSO, ISCAN, and the VENTANA logo are trademarks of Roche. All other trademarks are the property of their
respective owners.
Open Source And Commercial Software
Portions of the VENTANA iScan HT slide scanner might include one or more Open Source or Commercial Software programs. For
copyright and other notices and licensing information regarding such Software programs included with the VENTANA iScan HT slide
scanner please see Appendix D of the reference guide and the product on-line help pages included with the product.
The VENTANA iScan HT slide scanner as a whole may form a regulated device in accordance with the applicable laws - please refer to
the reference guide and the labeling for details. Please note that the respective authorization in accordance with the applicable laws lapse
in case of any unauthorized changes to the VENTANA iScan HT slide scanner. Any patient information depicted in this guide is fictitious
and for exemplary purpose only.
Contact
www.ventana.com
Ventana Medical Systems, Inc.
1910 E. Innovation Park Drive
Tucson, AZ 85755
USA
+1 520 887 2155
+1 800 227 2155 (USA)
Roche Diagnostics GmbH
Sandhofer Strasse 116
D-68305 Mannheim
Germany
+49 621 7590
Part No.: PL-000119-EN Rev. H iii
Table of Contents
About the VENTANA iScan HT Slide Scanner . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
Welcome!. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
This Guide Includes Instructions to:. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
Intended Use for the VENTANA iScan HT Slide Scanner: . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
Who Should Read this Guide? . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
What’s in this Guide?. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
Related Documents . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2
1: Safety Information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
Instrument Labels . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
Safety Instructions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4
Operating Environment . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5
Work Surface . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5
AC Power. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
Local Area Network (LAN) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
Telephone Use . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6
Software Compatibility . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
Computer and Monitor Specifications . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
Compliance Specifications. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
Hardware Specifications . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
Cyber Security . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
Securing Networks and Servers . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
Protecting Data. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
Evaluate Your Software Settings . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
Backup and Recovery . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
Environmental Specifications. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9
Slide Specifications and Barcodes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
Standard Slide . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
2: Operating the Scanner . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13
General Operating Procedures . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13
Starting the System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13
Starting the VENTANA iScan HT Software . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13
Shutting Down the System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14
Main View . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14
Main View Menu Pull-Downs . . . . . . . . . . . . . . . . . . .
. . . . . . . . . . . . . . . . . . . . . . . . . . . 15
Scanner LCD . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15
The Worklist. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16
Selecting Racks in the Worklist . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17
Viewing Rack Status in the Worklist . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18
Worklist Buttons . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19
Modifying the Worklist . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19
Interrupting the Worklist . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22
Aborting the System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22
3: Setting System Defaults. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23
General Tab - Application Settings and Values: . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23
Changing General Settings Options . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 24
File Management Tab - Settings and Values: . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26
Changing File Management Settings . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 28
iv Ventana Medical Systems, Inc.
VENTANA iScan HT User Guide
Scan Profile Tab - Settings and Values . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31
Scan Profile Values . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31
Creating a Scan Profile. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 32
Viewing a Scan Profile . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 35
Updating a Scan Profile . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 36
Deleting a Scan Profile . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 37
4: Rack Level Processing and Editing . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41
Create Thumbnails and/or Scans . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41
Scan Process . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43
Interrupting the scan. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 43
Changing Settings and Controls For the Rack . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 44
Selecting Racks for Editing. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45
Changing the Scan Profile . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45
Saving Changes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45
Focus Approach . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46
Magnification . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46
AOI Selection . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46
Enable Volume Scan . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47
Folder . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47
Annotations. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 48
5: Slide Level Editing . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49
Slide List . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49
Slide List Controls. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49
Slide List Details . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50
Changing Slide Settings . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 51
Saving Changes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 53
Changing the Scan Profile . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 53
Creating a Thumbnail or Scan . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57
Editing Slides . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 59
Open/View a Slide in the Thumbnail Pane . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 60
Inspect AOI and Focus Points . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61
Modifying the AOI . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 62
Scan the Slide . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 68
Using the Image Viewer. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 69
Re-Scan a Slide after a Successful Scan . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 70
6: File Management Utility . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 71
To access the File Management Utility: . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 71
A: Troubleshooting. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 75
System Abort . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 75
Recovery Console . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 75
Possible Recovery Scenarios . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 75
Hard Restart . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 78
Power Loss . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79
Unrecoverable Error . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79
Starting the Recovery Console . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79
Error Handling in General . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79
Power Failure or Abort. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 80
Scanner Problems . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 80
Index. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 81
Part No.: PL-000119-EN Rev. H 1
About the VENTANA iScan HT Slide Scanner
Welcome!
The VENTANA iScan HT slide scanner incorporates cutting edge optical, focus, and slide handling technologies to address
the high-volume needs of the anatomic pathology laboratory. Combining accurate area of interest (AOI) detection and industry
leading scan times, with reliable slide handling, the VENTANA iScan HT slide scanner empowers your laboratory to manage
high-throughput exceptional quality digital pathology images.
The VENTANA iScan HT slide scanner is fully integrated with the Virtuoso workflow management software, making it a
complete digital pathology solution from image acquisition through reporting. Only the VENTANA iScan HT slide scanner
from Ventana Medical Systems, Inc., a global leader in anatomic pathology delivers true workflow optimization in your
pathology laboratory.
This Guide Includes Instructions to:
Safely handle and work with the scanner.
Use the scanner to perform a one-touch, walk-away scan of one or more slides.
Use the scanner to perform a manual scan of one or more slides.
Use the Image Viewer to view digital-scanned slides locally or remotely.
Intended Use for the VENTANA iScan HT Slide Scanner:
Ventana's VENTANA iScan HT slide scanning system is a computer and imaging based device for in-vitro examination of
human tissue specimens. The system has the capability to scan, digitize, compress, store, retrieve and view digitized images of
human tissue slide specimen.
Who Should Read this Guide?
Pathologists and/or Technologists using the scanner to scan slides
Pathologists and/or Technologists using Image Viewer to view digital images of slides. See the Image Viewer Reference
Guide for additional information.
What’s in this Guide?
Safety Requirements and Notifications
“1: Safety Information” on page 3
Scanner Operations
“2: Operating the Scanner” on page 13
System Defaults
“3: Setting System Defaults” on page 23
Rack Process and Editing
“4: Rack Level Processing and Editing” on page 41
Slide Level Editing
“5: Slide Level Editing” on page 49
File Management Application
“6: File Management Utility” on page 71
Troubleshooting Information
“A: Troubleshooting” on page 75
2 Ventana Medical Systems, Inc.
About the VENTANA iScan HT Slide Scanner VENTANA iScan HT User Guide
Related Documents
For additional information, see the VENTANA iScan HT Reference Guide, the Virtuoso Reference Guide, and the Image
Viewer Reference Guide.
Part No.: PL-000119-EN Rev. H 3
1: Safety Information
You must read and understand and follow the safety requirements and notifications in this chapter before using the VENTANA
iScan HT slide scanner.1:
Instrument Labels
CAUTION: THE VENTANA iScan HT SLIDE SCANNER GENERATES, USES, AND
CAN RADIATE RADIO FREQUENCY ENERGY.
If not installed and used in accordance with the instructions in this guide, the scanner may cause
interference to radio communications. The scanner has been tested and found to comply with the
limits for a Class A computing device (pursuant to Subpart B of Part 15 FCC Rules), which are
designed to provide reasonable protection against such interference when the scanner is operated
in a commercial environment. Operation of the scanner in a residential area can cause
interference, in which case the user, at his own expense, will be required to take whatever
measures necessary to correct the interference.
CSA
ATTENTION: CONSULT ACCOMPANYING DOCUMENTS.
CAUTION: REPLACE FUSE ONLY WITH A UL LISTED OR RECOGNIZED 250V
2A RATED FUSE.
ATTENTION: DISPOSAL OF THE SCANNER UNIT MUST BE PERFORMED UNDER WASTE
ELECTRICAL AND ELECTRIC EQUIPMENT (WEEE) GUIDELINES.
4 Ventana Medical Systems, Inc.
1: Safety Information VENTANA iScan HT User Guide
Safety Instructions
Operating Instructions
• Read all safety and operating instructions before operating the scanner.
• Retain all safety and operating instructions for future reference.
Posted and Written Warnings
• Heed all warnings posted on the scanner and listed in the operating instructions.
Product Use Instructions
• Follow all operating and product use instructions.
Heat
• The scanner must be situated away from any heat sources such as radiators, heat
registers, stoves, or other products that produce heat.
Ventilation
• Slots and openings in the scanner provide ventilation. They insure reliable
operation of the scanner, keeping it from overheating. These openings must not be
blocked or covered during operation.
Water and Moisture
• Do not use the scanner near water; for example, near a water bath, wash bowl,
kitchen sink or laundry tub; in a wet basement; or near an open pool of water, or
other possible water hazards.
Attachments
• Do not use any attachments that are not recommended, as they may cause
hazards.
Power Sources
• The scanner must be operated from the type of power source indicated on the
marking label and in the installation instructions. If you are not sure of the type of
power supply to your facility, consult your local power company.
Grounding and Polarization
• The scanner is equipped with a polarized AC plug with integral safety ground pin.
Do not defeat the safety ground in any way, shape, or form.
Power Cord Protection
• Power supply cords must be routed so that they are not walked on or pinched by
items placed on or against them. Pay particular attention to the cords at AC wall
plugs and convenience receptacles, and at the point where the cord enters the
product.
• Power supply cords must be readily accessible in case power to the unit must be
intentionally interrupted.
Lightning
For added protection for the scanner during a lightning storm, or when the scanner
is left unattended and unused for long periods of time, unplug the scanner from the
AC wall outlet. This will prevent damage to the scanner due to lightning and power
line surges.
Power Loss
• In the event of a loss of power during the scanning or thumbnailing process, the
VENTANA iScan HT slide scanner will rely on power from the universal power
supply (UPS) to keep the vacuum on. You should use the Recovery Console and
follow the procedures to return slides to the rack.
Overloading
• Do not overload AC wall outlets, extension cords, or integral convenience outlets;
this can result in a fire or an electric shock hazard.
Object and Liquid Entry
• Never push objects of any kind into the scanner through openings in the scanner;
they may touch dangerous voltage points or short out parts, possibly resulting in a
fire or electric shock. Never spill liquid of any kind on the scanner. Do not place
liquids on the scanner.
Accessories
• Do not place the scanner on an unstable cart, stand, tripod, bracket, or table. The
scanner could fall, causing serious personal injury and/or damage to the scanner.
• Any mounting of the scanner must be done according to the installation
instructions.
Do not attempt to connect accessories or use cabling not explicitly provided for the
scanner.
Stationary Equipment
• The scanner should be moved only with extreme care. Quick stops, excessive
force, and uneven surfaces may cause the scanner to overturn.
VENTANA iScan HT User Guide 1: Safety Information
Part No.: PL-000119-EN Rev. H 5
Operating Environment
Work Surface
Neighboring Devices
• Electromagnetic interference (EMI) from external sources could affect scanner
operation. The scanner should be set off far enough from neighboring devices to
prevent any problems with EMI.
• Vibrations or jolts from neighboring devices can skew scanner performance. The
scanner should be set off far enough from neighboring devices to prevent any
problems caused by vibrations or jolts.
Network Connections
• The scanner must be set up and configured as specified in this document in order
to work properly over the Internet.
Insects
Do not allow insects to find their way into the scanner. They could damage internal
parts and negatively impact scanner operation or performance.
Servicing
• Refer all servicing to Certified Service personnel.
Damage Requiring Service
• Unplug the scanner from the wall AC outlet and refer all servicing to Certified
Service personnel under the following conditions:
- When the AC cord or plug is damaged.
- If liquid is spilled on the scanner.
- If objects are dropped inside the scanner.
- If the scanner is exposed to rain or water.
- If the scanner does not operate normally (according to operating instructions).
- If the scanner is dropped or is damaged in any way.
- When the scanner exhibits a distinct change in performance. (This may indicate a
need for service.)
Replacement Parts
When replacement parts are required, confirm that the Service Technician uses the
specified replacement parts. Unauthorized substitutions may result in fire, electric
shock, or other hazards.
Safety Check
• Upon completion of any repairs to the scanner, ask the Service Technician to
perform safety checks to determine that the scanner is in proper operating
condition.
Cleaning
• Do not use chemical cleaners or solvents. Use warm water with mild soap on a
damp, soft cloth; rinse and dry with a clean, damp cloth.
Product Disposal Instructions
• Dispose of any and all scanner parts according to the guidelines and regulations
specified by your city for electronic equipment and/or electronic component
disposal.
Lighting In work area: good and bright.
Air
In the room: clean and cool (67 to 76 degrees F / 19 to 24 degrees C), with maximum
humidity 30 to 80 percent.
Rigid Lab Bench Tabletop space: 60 x 30 (deep)
Weight Support To hold scanner unit and monitor: 800 lbs. (~363 kg)
User Access
In front of scanner: 3 ft. (minimum)
NOTE: The rear of the scanner near the power switch and the power connection
should be readily accessible so power to the unit can be cut or disconnected.
Space Beneath Bench To store computer that comes with scanner: 24 x 12 x 24 (high)
CAUTION: Replace fuse only with a UL Listed or
Recognized 250V 2A rated fuse.
6 Ventana Medical Systems, Inc.
1: Safety Information VENTANA iScan HT User Guide
AC Power
Figure 1-1. Electrical Plug and ON/OFF Switch.
Local Area Network (LAN)
Telephone Use
UPS
120 Volts
230 Volts
CAUTION: USE THE CORRECT POWER CORD.
If the power cord supplied with the scanner does not match the wall plug configuration, do not use
the cord. Contact Ventana Medical Systems, Inc. to obtain the proper cord. At least one grounded
dual AC wall socket (3-conductor) is recommended for a power source. A surge protector is also
recommended.
Network Internet access is required, with a fixed IP (or access through firewalls)
Transfer rate 100 Megabits per second
LAN connection, with Internet
access
Required for remote maintenance of the scanner over the Internet.
NOTE: A LAN connection is not required to operate the scanner. A LAN connection
is required only if remote access is necessary.
Location Near the scanner work area in the lab.
Use
Facilitates communication between technical personnel and scanner Operator (as
needed).
Fuse
Plug
On - Off switch
VENTANA iScan HT User Guide 1: Safety Information
Part No.: PL-000119-EN Rev. H 7
Software Compatibility
Please feel free to contact Ventana Technical Support if you have any additional questions regarding software compatibility.
Computer and Monitor Specifications
Compliance Specifications
CAUTION: DO NOT INSTALL MEMORY UPGRADES, DRIVERS, GRAPHIC,
VIDEO CARDS, EXTERNAL DEVICES, OR ANY OTHER HARDWARE
AND SOFTWARE ON THE WORKSTATION CONNECTED TO THE
SCANNER.
Such installations can interfere with the operation of the scanner. Contact Ventana Technical
Support (Tel (USA): +1 800 227 2155, or Tel: +1 520 887 2155; for Technical Support, press 1)
before installing any of the above items.
Do not install any other
software or hardware on the
system.
• Other software or hardware could interfere with scanner operation and void the
warranty.
The controller computer
comes with virus detection
software installed.
• The Antivirus software that comes with the scanner has been tested and validated
by Ventana. Ventana can guarantee the scanner's performance ONLY with
supported versions of Antivirus software. Ventana currently supports Symantec
Endpoint Protection v. 11, 64-bit.
• Virus definition files can be updated automatically.
• Do not update the Antivirus software to a new version. If you have any questions
regarding this or need to upgrade your Antivirus software, please call Ventana
Technical Support to verify that this will not create any performance issues.
Do not allow your scanner
to accept automatic
operating system updates
over the Internet.
• Automatic operating system updates over the Internet can interfere with scanner
operation.
• Please do not update your operating system without consulting someone from
Ventana Technical Support.
Scheduled or unscheduled
system software or
hardware backup or
maintenance.
• Backup or maintenance can interfere with scanner operation. Please call Ventana
Technical Support to verify that this will not create any performance issues.
Work Station Microsoft Windows; 64-bit Operating System
Storage Customer Usable Storage]- 2TB, SATA
Connectivity 2 GIGABIT Ethernet ports
Monitor 24 flat-panel, high-resolution monitor (1920 x 1200)
CE Safety EN61010-2
This device meets the safety requirements for electrical equipment for measurement,
control, and laboratory use.
8 Ventana Medical Systems, Inc.
1: Safety Information VENTANA iScan HT User Guide
Hardware Specifications
Cyber Security
Any device that is connected to a network (internally or externally) has the potential to be compromised by unauthorized
access or viruses. As with most devices, the VENTANA iScan HT slide scanner is designed to run on a computer utilizing
Micros oft Windows and virus protection software which requires the validation and implementation of the appropriate
patches.
Some of the potential cyber security hazards are:
Malicious software that alters the device software (such as viruses)
Unauthorized access to the scanner that could compromise data safety
Security of data transmitted over the internet
Cyber security involves protecting data by preventing, detecting, and responding to malicious cyber attacks. Cyber attacks
could involve computer viruses which can completely erase data or hackers who alter files or even use the device as a host to
attack other devices. As serious as these hazards are, steps can be taken to maximize cyber security.
Securing Networks and Servers
Network security consists of the provisions made in the computer network infrastructure, policies adopted by the network
administrator to protect the network, and the network resources that prevent unauthorized access.
The following are critical steps for securing a network server:
Physical security (servers and network infrastructure behind locked doors)
Use of robust passwords
System and data backups (at regular intervals)
Data protection
Terminating unused services
Restricting access to used services
The following are critical steps and methodologies used to secure network and servers:
Data protection
Data backups (at regular intervals)
Input Format 25 mm x 75 mm microscope slides; 26 mm x 76 mm microscope slides
Slide Capacity 1 to 360 slides, using 18 integrated racks
Scanning Magnification 20X and 40X
Barcode Capability 1D and 2D option
Light Source Integrated LED
Touch-Screen LCD 10.1“ (257 mm) Diagonal, 1024 x 600 Resolution
Scan Viewing 24-bit true color
Slide Storage Format BIF and TIF
Dimensions
35.6” W x 27.5” D x 25.5” H
90.424 cm W x 69.85 cm D x 64.77 cm H
904.24 mm W x 698.5 mm D x 647.7 mm H
Scanner Weight Approximately 370 lbs. (~170 kg)
Power 100-220 VAC, 50/60 Hz, 400 W (includes light source)
Current 5 Amps
VENTANA iScan HT User Guide 1: Safety Information
Part No.: PL-000119-EN Rev. H 9
Refusal of automatic updates from off-the-shelf software
Antivirus software for computers and servers
Protecting Data
Establishment of a network firewall and protection of the network against viruses using anti-virus software are effective
methods to protect data. Virus definitions should be kept up to date and regular scans of computers for spyware should be
performed using a legitimate anti-spyware application. If viruses or spyware are found, remove them immediately.
Evaluate Your Software Settings
The default settings of most software enable all available functionality. However, hackers may be able to take advantage of
this functionality to access devices. It is especially important to check the settings for software that connects to the internet
(browsers, e-mail clients, etc.). Apply the highest level of security available that still provides needed functionality.
Backup and Recovery
In order to develop a successful backup and recovery plan, comprehension of data accessibility needs and the potential impact
of data loss is essential. Automatic backup procedures need to be adopted using a data backup utility.
Environmental Specifications
NOTE: Routine set up and alignment is required by certified technicians.
Use
The scanner is intended for use indoors in an office or lab environment, with a standard
connection to the MAINS electric power supply (115V/20A or 230V/16A). The unit falls
under the following category, as defined in IEC 61010-2 and IEC 60664: Pollution
Degree 2, Overvoltage Category 2.
Lab Standard lab cleanliness procedures
Altitude Up to 2000 meters
Room temperature Range: 70 ±4 degrees F; 21 ± 2 degrees C
Maximum humidity 90% (non-condensing)
Recommended Operating
Temperature
70 degrees F; 21 degrees C
Maximum Operating
Humidity
30-80%, non-condensing
Maximum Elevation 2000 Meters
Transportation Temperature -4 to +122 degrees F; -20 to +50 degrees C
MAINS supply voltage
fluctuations
• Up to ± 10% of 100-120 V in Japan/US
• Up to 220-240 V in Europe
• Transient overvoltages (category II of IEC 60364-4-443) typically present on
MAINS supply
10 Ventana Medical Systems, Inc.
1: Safety Information VENTANA iScan HT User Guide
Slide Specifications and Barcodes
The VENTANA iScan HT scanner allows you to scan up to 360 slides at the touch of a button and supports the use of standard
slides. This chapter includes specifications for slides and slide handling recommendations for use with the scanner and
configuring barcodes.
Standard Slide
Figure 1-2. Standard Slide.
Slide Length, Width, Thickness
NOTE: In order to work with the scanner, your slides must meet these specifications.
Slide Scannable Region
WARNING: DO NOT USE CRACKED OR BROKEN SLIDES.
Cracked or broken slides can adversely affect the operation of the scanner.
WARNING: DO NOT PLACE ANY BIOHAZARDOUS MATERIALS ON YOUR
SLIDES.
Length
2.965—3.013 inches (75.311—76.5302 mm)
Width
0.970—1.030 inches (24.6379—26.162 mm)
Thickness
0.038—0.055 inches (0.9652—1.397 mm); at label end, includes slide, label, and cover
slip.
Scannable Slide Region
Up to 1.816 x 1.030 Inches (46.1264 mm x 26.162 mm) maximum
The label and border is not scanned
(See Figure 1-3)
.
VENTANA iScan HT User Guide 1: Safety Information
Part No.: PL-000119-EN Rev. H 11
Slide Label Region
NOTE: One label can be placed over another (overlapping labels, or overlabeling), but a 0.157-inch (4-
mm) buffer must be maintained between the top edge of the label and the top edge of the slide.
For more information, see “Overlapping Labels (Overlabeling)” on page 12.
Figure 1-3. Slide Specifications.
Length
1 inch (25.40 mm)
Width
Same as Slide Width: 0.970—1.030 inches (24.6379—26.162 mm)
Thickness
Same as Slide Thickness: 0.038—0.055 inches (0.9652—1.397 mm). Includes slide and
label.
Barcode/Label
Slide Length: 2.965 — 3.013 Inches (75.311 — 76.5302 MM)
Slide Width:
0.970 — 1.030
Inches
Slide Thickness: 0.038 — 0.055 Inches (0.9652 — 1.397 MM)
(24.6379 —
26.162 mm)
At label End (Includes Slide and Label)
123456789
|||||||||
1 Inch
(25.40 mm)
Top Edge
of Slide
Scannable Region
2.013 x 1.030 Inches Max
(51.1302 mm x 26.162 mm)
1.965 x 0.970 Inches Min
(49.911mm x 24.638 mm)
= Not Scannable
12 Ventana Medical Systems, Inc.
1: Safety Information VENTANA iScan HT User Guide
Slide Label
Requirements:
Each label must be placed on the same side of the slide as the tissue:
Each label must fit in the designated label area.
Each label must fit inside the boundary of the slide, without protruding over any edge.
Each label must adhere securely to the slide.
All label adhesive must be removed from each slide (adhesive can stick to the slide grabber, causing a slide to break).
If one label is placed over another (overlapping labels, or overlabeling, see below), ensure that a 0.157 inch (4 mm) buffer
exists between the top edge of the label and the top edge of the slide.
Overlapping Labels (Overlabeling)
Labels can be overlapped, but this practice is not recommended.
Overlabeling Rule
If one label is placed over another, a 0.157 inch (4 mm) buffer must be maintained between the top edge of the label and the
top edge of the slide.
Figure 1-4. Overlabeling Rule: 0.157 inch (4 mm) Buffer Around Slide.
Slide Cover Slip
Requirements:
Each cover slip must be placed on the same side of the slide as the tissue.
Each cover slip must fit in the designated cover slip area, with no overlapping.
Each cover slip must fit inside the boundary of the slide, without protruding over any edge.
Recommendations:
Each cover slip must adhere securely to the slide.
CAUTION: Failure to follow these requirements can adversely affect the operation
of the scanner.
CAUTION: Failure to follow these requirements can adversely affect the operation
of the scanner.
First Label
Second Label
Scannable Region
Buffer:
0.157 inches
(4 mm)
Not Scannable
0.197 inches
(5.0038 mm)
Part No.: PL-000119-EN Rev. H 13
2: Operating the Scanner
General Operating Procedures
The scanner needs to be setup and initialized before any operation. The scanner must be powered on, the scanner PC and
monitor must be powered on, and the VENTANA iScan HT application must be started.
Starting the System
Confirm that the computer and monitor connected to the scanner are powered on and ready for use.
1. Toggle the Main Power switch on the back of the scanner to the ON (I) position. See “AC Power” on page 6.
2. Press the Power button on the front panel of the computer monitor.
3. Press the Power button on the front panel of the computer workstation.
4. When the Microsoft Windows log-on screen appears, press
Ctrl + Alt + Del on the keyboard.
5. Enter your user name and password.
You are logged in to the desktop.
NOTE: For best results, leave the scanner powered on unless it is going to be idle for an extended
time.
Starting the VENTANA iScan HT Software
Start the VENTANA iScan HT software by clicking on the VENTANA logo icon on the desktop.
Figure 2-1. VENTANA Logo Icon.
The scanner initializing screen appears then the Main View displays. This can take a few minutes.
14 Ventana Medical Systems, Inc.
2: Operating the Scanner VENTANA iScan HT User Guide
Shutting Down the System
If you need to shut down the system, do the following:
1. Let the scanner complete the current session.
2. Remove any racks and slides from the scanner, if necessary.
3. Click
Exit from the File pull-down on the Main View.
Figure 2-2. Exit.
4. Back up your computer, if necessary.
5. Shut down the computer, if necessary.
6. Turn off power to monitor.
7. Turn off power to the scanner.
Main View
During initialization, the VENTANA iScan HT scanner detects racks in the scanner and the rack map is displayed in the Main
View.
Figure 2-3. Main View for Racks.
WorklistRack Map
Rack Settings
Carousel Indicator
VENTANA iScan HT User Guide 2: Operating the Scanner
Part No.: PL-000119-EN Rev. H 15
Main View Menu Pull-Downs
Scanner LCD
The scanner LCD is a touchscreen where you control moving the carousel and see the current status of the scanner.
Figure 2-4. Touchscreen LCD.
The following buttons are displayed on the LCD:
IMPORTANT: The carousel will not rotate to another rack while the door is opened and the scanner
processes the current rack.
Menu Description
File
Exit
- You can exit the VENTANA iScan HT scanner from the File pull-
down menu. Click the Exit icon to close the VENTANA iScan HT software.
Abort
- Use the abort button for emergency situations. See “Aborting the
System” on page 22 for additional information.
Options
From the Options pull-down menu, you can edit system settings and
display the recovery console.
Settings
- You access the scanner default options and settings from the
Settings selection. See “3: Setting System Defaults” on page 23 for in-
depth information on:
• General Application Settings and Values
• File Management Settings and Values
• Scan Profile Settings and Values
Recovery Console
- For information on troubleshooting with the
Recovery Console see “Recovery Console” on page 75.
Help
Use the Help pull-down to access:
About
- the About VENTANA iScan HT information
User Guide - online user manual
Reference Guide
- online reference documentation
Color Legend
- See“Worklist Color Legend” on page 18.
16 Ventana Medical Systems, Inc.
2: Operating the Scanner VENTANA iScan HT User Guide
The Worklist
When racks with slides are added to the carousel, they appear on the Rack Map. Once you associate an action to a rack
(thumbnail or scan), it also is added to the Worklist. Once racks are added to the Worklist, you can run the process, remove
racks from the Worklist, make a rack in the Worklist STAT, and pause the process.
To modify the scan setting for one or more racks, see “4: Rack Level Processing and Editing” on page 41.
To modify the slide settings for one or more slides, see “5: Slide Level Editing” on page 49.
Press to move the carousel to the left 1 rack.
Press to move the carousel to the left 3 racks.
Press to move the carousel to the right 1 rack.
Press to move the carousel to the right 3 racks.
Press to abort the current process. See “Aborting the System” on page 22
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