Structural study of
Caenorhabditis elegans
MATERIALS AND METHODS
Wildtype L4 stage C. elegans (N2 strain) were placed in the 100 µm deep side of Lecithin-coated (see detailed protocol*) type A 3 mm
Cu/Au carriers (Leica) with extracellular filler containing 1% (w/v) Agarose type IX and 2% (w/v) Bovine Serum Albumin in bacteria
medium (see preparation details**) and sandwiched with the flat side of Lecithin-coated type B 3 mm Cu/Au carriers (Leica). Samples
were frozen in a high-pressure freezer (EM ICE, Leica). After freezing sandwiches were opened in liquid nitrogen and the type A carriers
were transferred into flow-through capsules (plastic capsules D5 x H15 mm, Leica) to the automated freeze-substitution device (AFS2,
Leica) set at –90 °C. Flow-through capsules with samples were placed into 2.0 ml Sarstedt tubes containing 800 µl precooled 2% (w/v)
Osmium tetroxide in anhydrous Methanol (see modified “Karreman” protocol***). The rubber rings from the lids of these Sarstedt tubes
have been removed.
Samples were kept at –90 °C for 48 h in this solution, next washed 4x 30 min at –90 °C with 500 µl precooled 2% (w/v) Osmium
tetroxide in anhydrous Acetone and finally left for 46 hat –90 °C in 2.0 ml Sarstedt tubes containing 500 µl precooled 2% (w/v) Osmium
tetroxide in anhydrous Acetone. Washing steps were carried out by transferring the flow-through capsules with samples to 2.0 ml
Sarstedt tubes containing 500 µl precooled 2% (w/v) Osmium tetroxide in anhydrous Acetone.
Next samples were gradually warmed from –90 °C to –60 °C (increment of 2 °C/h); kept at –60 °C for 8 h before warmed up to –30 °C
(increment of 2 °C/h). At –30 °C samples were kept for 8 h and finally were placed on ice for 1 h followed by 1 h at room temperature.
Samples were washed 3x 5 min with anhydrous Acetone by transferring the flow-through capsules with samples to 1.5 ml Eppendorf
tubes containing 500 µl anhydrous Acetone. A volume of 800 µl freeze-substitution medium was chosen to have enough capacity to
replace the water in the sample for Acetone. For all next steps a volume of 500 µl was used to prevent loss of the sample out of the
flow-through capsule by overflow.
After the last wash with anhydrous Acetone samples were infiltrated with Epon resin (see detailed protocol****). Infiltration with Epon
resin/ Acetone mixtures was perfor¬med at room temperature by the following steps:
Epon : Acetone = 1 : 2 for 2 h (33% (v/v) Epon)
Epon : Acetone = 1 : 1 for 18 h (50% (v/v) Epon)
Epon : Acetone = 2 : 1 for 8 h (66% (v/v) Epon)
Epon : Acetone = 3 : 1 for 18 h (75% (v/v) Epon)
pure Epon for 8 h (100% Epon)
pure Epon for 18 h (100% Epon)
pure Epon for 6 h (100% Epon)
Finally, individual C. elegans were taken out of the type A carriers and placed separately in the cavities of an embedding mould (Aclar
scientific). The cavities were filled with pure EPON and polymerized for 72 h at 65 °C. Approximately 70 nm thick sections were cut on
an ultramicrotome (Ultracut UCT, Leica) and collected on Carbon coated-Formvar-50 mesh hexagonal copper grids. The sections were
contrasted 6 min with 7% (w/v) Uranyl Acetate in 70% Methanol and 2 min with Reynolds Lead Citrate.
Micrographs were acquired on a Tecnai 12 electron microscope (FEI) operated at 100 kV and spotsize 3. Electron micrographs (Binning1,
2048x2048 pixels) were collected with a TIETZ camera (TIETZ TVIPS TemCam F214) at 15,000x magnification (pixel size 0.375nm).
Courtesy: Elly van Donselaar
1
, Martin Harterink
1
, Karin Vocking
1
and Rob Mesman
2
1 Universiteit Utrecht, The Netherlands, 2 Radboud Universiteit Nijmegen, The Netherlands
* Lecithin coating of carriers:
Prepare a solution of 2% (w/v) Lecithin (L-α-Phosphatidylcholine from egg yolk, Fluka-61755) in Chloroform. Dip the type A carriers one
by one in the Lecithin solution and lay the carriers with the 100 µm deep side up on filter paper. Dip also the type B carriers in the
Lecithin solution and lay the carriers with the flat side up on filter paper. The carriers will be covered with a thin layer of Lecithin after
the Chloroform has evaporated.
2